Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 AC026471.5-201ENST00000615068 467 ntBASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
AP4E1Q9UPM8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AL355355.2-201ENST00000442321 338 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 CKBP1-201ENST00000565489 1086 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AP000692.2-201ENST00000608391 879 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 REXO1L12P-201ENST00000622156 912 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 AC004408.2-201ENST00000623613 2777 ntBASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP4E1Q9UPM8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 AC093503.3-201ENST00000624917 2352 ntBASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TSPY7P-201ENST00000431358 1114 ntBASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP4E1Q9UPM8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 DGCR10-201ENST00000609839 495 ntBASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.69■□□□□ 0.74
AP4E1Q9UPM8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms