Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHGB4Q9UN71 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PCDHGB4Q9UN71 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 OR6D1P-202ENST00000641007 5290 ntBASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 RPS2P52-201ENST00000469610 820 ntBASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHGB4Q9UN71 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB4Q9UN71 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGB4Q9UN71 NOC2LP2-201ENST00000407594 1944 ntBASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 AC139713.2-201ENST00000641328 2723 ntBASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 AC092368.3-202ENST00000574180 1591 ntBASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 NOC2LP1-202ENST00000452600 2235 ntBASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGB4Q9UN71 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 AL121906.2-201ENST00000621597 723 ntBASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGB4Q9UN71 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms