Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 AC104076.2-201ENST00000448912 469 ntBASIC20.08■□□□□ 0.81
CDH9Q9ULB4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH9Q9ULB4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH9Q9ULB4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 AC006011.2-201ENST00000621313 1158 ntBASIC20.07■□□□□ 0.8
CDH9Q9ULB4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CDH9Q9ULB4 GPAT2P1-201ENST00000444924 1672 ntBASIC20.07■□□□□ 0.8
CDH9Q9ULB4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.06■□□□□ 0.8
CDH9Q9ULB4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 AL023284.2-201ENST00000405850 579 ntBASIC20.06■□□□□ 0.8
CDH9Q9ULB4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 AC010331.1-201ENST00000611423 582 ntBASIC20.06■□□□□ 0.8
CDH9Q9ULB4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH9Q9ULB4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 AC005332.7-201ENST00000614046 2005 ntBASIC20.05■□□□□ 0.8
CDH9Q9ULB4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 AL049597.2-201ENST00000565575 961 ntBASIC20.05■□□□□ 0.8
CDH9Q9ULB4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH9Q9ULB4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms