Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
GTF3C4Q9UKN8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GTF3C4Q9UKN8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GTF3C4Q9UKN8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 AC145285.6-201ENST00000604632 637 ntBASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 LINC01568-207ENST00000641790 1380 ntBASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GTF3C4Q9UKN8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
GTF3C4Q9UKN8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 AL049812.1-201ENST00000432563 2267 ntBASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 MFAP1P1-201ENST00000442257 1255 ntBASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GTF3C4Q9UKN8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 AC096733.2-201ENST00000609937 1394 ntBASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF3C4Q9UKN8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF3C4Q9UKN8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms