Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT1Q9P2V4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LRIT1Q9P2V4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 IER3-202ENST00000376377 1350 ntBASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 AC112907.2-201ENST00000448639 330 ntBASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.35■□□□□ 0.53
LRIT1Q9P2V4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 STARP1-201ENST00000397973 869 ntBASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
LRIT1Q9P2V4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms