Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTN3Q9P232 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTN3Q9P232 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTN3Q9P232 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.45■□□□□ 0.86
CNTN3Q9P232 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTN3Q9P232 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.45■□□□□ 0.86
CNTN3Q9P232 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNTN3Q9P232 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTN3Q9P232 GPAT2P1-201ENST00000444924 1672 ntBASIC20.45■□□□□ 0.86
CNTN3Q9P232 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTN3Q9P232 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.44■□□□□ 0.86
CNTN3Q9P232 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 AK4P3-201ENST00000418260 669 ntBASIC20.44■□□□□ 0.86
CNTN3Q9P232 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 YBX1P2-201ENST00000489612 999 ntBASIC20.44■□□□□ 0.86
CNTN3Q9P232 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 AL445228.2-201ENST00000605589 952 ntBASIC20.44■□□□□ 0.86
CNTN3Q9P232 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTN3Q9P232 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNTN3Q9P232 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 AL023284.2-201ENST00000405850 579 ntBASIC20.43■□□□□ 0.86
CNTN3Q9P232 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 KRT18P35-201ENST00000510488 1269 ntBASIC20.43■□□□□ 0.86
CNTN3Q9P232 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.43■□□□□ 0.86
CNTN3Q9P232 CR769767.2-201ENST00000622735 460 ntBASIC20.43■□□□□ 0.86
CNTN3Q9P232 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTN3Q9P232 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 AC063952.2-201ENST00000498792 1227 ntBASIC20.42■□□□□ 0.86
CNTN3Q9P232 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 WWOX-216ENST00000569818 525 ntBASIC20.42■□□□□ 0.86
CNTN3Q9P232 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 FP475955.4-201ENST00000623131 1990 ntBASIC20.42■□□□□ 0.86
CNTN3Q9P232 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.42■□□□□ 0.86
CNTN3Q9P232 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTN3Q9P232 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTN3Q9P232 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTN3Q9P232 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms