Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 FOSL1P1-201ENST00000511041 816 ntBASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 AC090616.6-201ENST00000582640 721 ntBASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 AC010240.3-201ENST00000607688 395 ntBASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
SLC52A1Q9NWF4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SLC52A1Q9NWF4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SLC52A1Q9NWF4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
SLC52A1Q9NWF4 Z83836.1-201ENST00000624605 1642 ntBASIC27.2■■□□□ 1.95
SLC52A1Q9NWF4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC27.2■■□□□ 1.95
SLC52A1Q9NWF4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 GXYLT1P4-201ENST00000613576 1192 ntBASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SLC52A1Q9NWF4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 AL390719.2-201ENST00000606993 987 ntBASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC52A1Q9NWF4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 KRT18P23-201ENST00000435622 1283 ntBASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 AP002469.2-201ENST00000531724 424 ntBASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 BMF-207ENST00000559701 630 ntTSL 3 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 LINC01711-201ENST00000598340 967 ntBASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC52A1Q9NWF4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 AC005332.3-201ENST00000589904 676 ntBASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 TK1-205ENST00000590862 642 ntTSL 3 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC27.17■■□□□ 1.94
SLC52A1Q9NWF4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 SLC25A6P4-201ENST00000586535 553 ntBASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 AL512353.2-201ENST00000448759 1962 ntBASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms