Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CISHQ9NSE2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CISHQ9NSE2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CISHQ9NSE2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CISHQ9NSE2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CISHQ9NSE2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CISHQ9NSE2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.27■□□□□ 0.83
CISHQ9NSE2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CISHQ9NSE2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.27■□□□□ 0.83
CISHQ9NSE2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.27■□□□□ 0.83
CISHQ9NSE2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CISHQ9NSE2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CISHQ9NSE2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CISHQ9NSE2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.25■□□□□ 0.83
CISHQ9NSE2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CISHQ9NSE2 AC006333.2-201ENST00000607957 2099 ntBASIC20.25■□□□□ 0.83
CISHQ9NSE2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 KRT8P3-201ENST00000519669 1449 ntBASIC20.24■□□□□ 0.83
CISHQ9NSE2 KRT8P9-201ENST00000558927 1449 ntBASIC20.24■□□□□ 0.83
CISHQ9NSE2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CISHQ9NSE2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CISHQ9NSE2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CISHQ9NSE2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CISHQ9NSE2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms