Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 CDV3P1-201ENST00000471403 739 ntBASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AL139384.1-201ENST00000612143 3047 ntBASIC17.24■□□□□ 0.35
HMG20AQ9NP66 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AC084018.2-201ENST00000613093 2607 ntBASIC17.24■□□□□ 0.35
HMG20AQ9NP66 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AC087623.3-201ENST00000607047 1098 ntBASIC17.24■□□□□ 0.35
HMG20AQ9NP66 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.24■□□□□ 0.35
HMG20AQ9NP66 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 PCDHA12-202ENST00000613593 2588 ntBASIC17.24■□□□□ 0.35
HMG20AQ9NP66 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20AQ9NP66 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 LINC00896-202ENST00000609602 2128 ntBASIC17.23■□□□□ 0.35
HMG20AQ9NP66 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 AL512353.2-201ENST00000448759 1962 ntBASIC17.23■□□□□ 0.35
HMG20AQ9NP66 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 AC141586.3-201ENST00000562166 1838 ntBASIC17.23■□□□□ 0.35
HMG20AQ9NP66 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMG20AQ9NP66 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMG20AQ9NP66 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms