Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 RPS2P52-201ENST00000469610 820 ntBASIC16.57■□□□□ 0.24
ELL3Q9HB65 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.57■□□□□ 0.24
ELL3Q9HB65 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ELL3Q9HB65 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 TEX21P-204ENST00000641479 1693 ntBASIC16.56■□□□□ 0.24
ELL3Q9HB65 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.56■□□□□ 0.24
ELL3Q9HB65 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 CD99P1-205ENST00000527459 561 ntBASIC16.56■□□□□ 0.24
ELL3Q9HB65 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 MIR4651-201ENST00000582622 73 ntBASIC16.56■□□□□ 0.24
ELL3Q9HB65 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AL049812.1-201ENST00000432563 2267 ntBASIC16.56■□□□□ 0.24
ELL3Q9HB65 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.56■□□□□ 0.24
ELL3Q9HB65 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ELL3Q9HB65 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 AC141586.3-201ENST00000562166 1838 ntBASIC16.55■□□□□ 0.24
ELL3Q9HB65 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 AP006587.1-201ENST00000534129 1502 ntBASIC16.55■□□□□ 0.24
ELL3Q9HB65 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ELL3Q9HB65 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
ELL3Q9HB65 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ELL3Q9HB65 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 UNC93B5-201ENST00000530315 699 ntBASIC16.54■□□□□ 0.24
ELL3Q9HB65 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.54■□□□□ 0.24
ELL3Q9HB65 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms