Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 AC079776.4-201ENST00000511039 504 ntBASIC16.11■□□□□ 0.17
GSX1Q9H4S2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GSX1Q9H4S2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.1■□□□□ 0.17
GSX1Q9H4S2 EMBP1-201ENST00000458200 901 ntBASIC16.1■□□□□ 0.17
GSX1Q9H4S2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 AC026471.1-201ENST00000564629 3026 ntBASIC16.1■□□□□ 0.17
GSX1Q9H4S2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.1■□□□□ 0.17
GSX1Q9H4S2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 LETM1P2-201ENST00000597330 2178 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AL031008.1-201ENST00000619963 541 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AC112907.3-201ENST00000577781 2400 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 AC011484.1-201ENST00000377652 1995 ntBASIC16.09■□□□□ 0.17
GSX1Q9H4S2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSX1Q9H4S2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GSX1Q9H4S2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.08■□□□□ 0.17
GSX1Q9H4S2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
GSX1Q9H4S2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.08■□□□□ 0.17
GSX1Q9H4S2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.08■□□□□ 0.16
GSX1Q9H4S2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms