Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCSER1Q9C0I3 DGCR10-201ENST00000609839 495 ntBASIC21.28■■□□□ 1
CCSER1Q9C0I3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.28■■□□□ 1
CCSER1Q9C0I3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSER1Q9C0I3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCSER1Q9C0I3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CCSER1Q9C0I3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCSER1Q9C0I3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.28■■□□□ 1
CCSER1Q9C0I3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.28■■□□□ 1
CCSER1Q9C0I3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 AC096733.2-201ENST00000609937 1394 ntBASIC21.27■■□□□ 1
CCSER1Q9C0I3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 AC008550.1-201ENST00000511500 884 ntBASIC21.27■■□□□ 1
CCSER1Q9C0I3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCSER1Q9C0I3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCSER1Q9C0I3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCSER1Q9C0I3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 KRT8P32-201ENST00000512863 1461 ntBASIC21.26■□□□□ 0.99
CCSER1Q9C0I3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 HEIH-201ENST00000623091 1652 ntBASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 REXO1L10P-201ENST00000615707 1290 ntBASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 REXO1L12P-201ENST00000622156 912 ntBASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 AC068587.9-201ENST00000641814 219 ntBASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCSER1Q9C0I3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCSER1Q9C0I3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.23■□□□□ 0.99
CCSER1Q9C0I3 AC026471.5-201ENST00000615068 467 ntBASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms