Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 AC005261.4-201ENST00000600047 1385 ntBASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
KRTAP3-3Q9BYR6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 PRC1-AS1-201ENST00000554388 1525 ntTSL 2 BASIC11.77□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC00173-203ENST00000480237 1597 ntTSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 SLC20A1P1-201ENST00000413906 956 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC020983.1-201ENST00000417063 543 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 OFD1P18Y-201ENST00000420889 959 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AL035425.1-202ENST00000436013 1142 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 FERP1-201ENST00000436391 793 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ADI1P1-201ENST00000438914 538 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AL645924.2-201ENST00000508865 900 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 MTATP6P1-201ENST00000514057 681 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 GCSHP4-201ENST00000538792 439 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 BMS1P16-201ENST00000556075 1147 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC097359.3-201ENST00000603982 1210 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC092944.2-201ENST00000605443 889 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC091544.6-201ENST00000607766 446 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 AC012020.1-201ENST00000624541 1728 ntBASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KRTAP3-3Q9BYR6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ZIK1P1-201ENST00000456074 1459 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ANKRD22-201ENST00000371930 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 RNU6-692P-201ENST00000384496 107 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 HMGB1P13-201ENST00000406019 642 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 MTCO1P52-201ENST00000433928 531 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC003071.1-201ENST00000451219 789 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 NIPA2P2-201ENST00000496376 1083 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC074087.1-201ENST00000512059 724 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC010306.1-201ENST00000523223 1117 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC008813.1-201ENST00000536597 885 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L13-201ENST00000554103 1267 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC025627.1-201ENST00000574267 730 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 AC092634.5-207ENST00000596569 805 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L15-201ENST00000611059 1267 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms