Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.1■■□□□ 1.29
RTFDC1Q9BY42 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 TPSP2-201ENST00000561760 610 ntBASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 AC112497.1-201ENST00000624824 639 ntBASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.09■■□□□ 1.29
RTFDC1Q9BY42 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 TSPY22P-201ENST00000427496 604 ntBASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RTFDC1Q9BY42 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTFDC1Q9BY42 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTFDC1Q9BY42 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RTFDC1Q9BY42 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RTFDC1Q9BY42 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RTFDC1Q9BY42 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 KRT18P1-202ENST00000452408 1331 ntBASIC23.07■■□□□ 1.28
RTFDC1Q9BY42 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 EMBP1-201ENST00000458200 901 ntBASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 AC009078.2-202ENST00000463353 338 ntBASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 RNF126P1-202ENST00000569893 925 ntBASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RTFDC1Q9BY42 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RTFDC1Q9BY42 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms