Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMOQ99835 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMOQ99835 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMOQ99835 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.93■□□□□ 0.78
SMOQ99835 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMOQ99835 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 AL023284.2-201ENST00000405850 579 ntBASIC19.93■□□□□ 0.78
SMOQ99835 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.93■□□□□ 0.78
SMOQ99835 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
SMOQ99835 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.93■□□□□ 0.78
SMOQ99835 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.93■□□□□ 0.78
SMOQ99835 AL049812.1-201ENST00000432563 2267 ntBASIC19.93■□□□□ 0.78
SMOQ99835 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SMOQ99835 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
SMOQ99835 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMOQ99835 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
SMOQ99835 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMOQ99835 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.92■□□□□ 0.78
SMOQ99835 ATP5G1P1-201ENST00000448724 379 ntBASIC19.92■□□□□ 0.78
SMOQ99835 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.92■□□□□ 0.78
SMOQ99835 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMOQ99835 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
SMOQ99835 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 AC104076.2-201ENST00000448912 469 ntBASIC19.91■□□□□ 0.78
SMOQ99835 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.91■□□□□ 0.78
SMOQ99835 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SMOQ99835 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMOQ99835 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SMOQ99835 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMOQ99835 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SMOQ99835 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.91■□□□□ 0.78
SMOQ99835 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMOQ99835 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMOQ99835 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SMOQ99835 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.91■□□□□ 0.78
SMOQ99835 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 AL512353.2-201ENST00000448759 1962 ntBASIC19.9■□□□□ 0.78
SMOQ99835 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.9■□□□□ 0.78
SMOQ99835 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMOQ99835 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.9■□□□□ 0.78
SMOQ99835 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.9■□□□□ 0.78
SMOQ99835 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.9■□□□□ 0.78
SMOQ99835 AC006011.2-201ENST00000621313 1158 ntBASIC19.9■□□□□ 0.78
SMOQ99835 AC141257.4-201ENST00000634557 245 ntBASIC19.9■□□□□ 0.78
SMOQ99835 AC136944.6-201ENST00000634818 245 ntBASIC19.9■□□□□ 0.78
SMOQ99835 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMOQ99835 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms