Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS2Q99743 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.59■□□□□ 0.57
NPAS2Q99743 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.59■□□□□ 0.57
NPAS2Q99743 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS2Q99743 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS2Q99743 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS2Q99743 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS2Q99743 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS2Q99743 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS2Q99743 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS2Q99743 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS2Q99743 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.58■□□□□ 0.57
NPAS2Q99743 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.58■□□□□ 0.57
NPAS2Q99743 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS2Q99743 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 AL390719.1-204ENST00000412397 1219 ntBASIC18.58■□□□□ 0.56
NPAS2Q99743 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 AC023632.3-201ENST00000521633 145 ntBASIC18.58■□□□□ 0.56
NPAS2Q99743 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS2Q99743 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.58■□□□□ 0.56
NPAS2Q99743 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NPAS2Q99743 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NPAS2Q99743 AC079598.2-202ENST00000546624 1451 ntBASIC18.58■□□□□ 0.56
NPAS2Q99743 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS2Q99743 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS2Q99743 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS2Q99743 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS2Q99743 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS2Q99743 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS2Q99743 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS2Q99743 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS2Q99743 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 AP006294.2-201ENST00000641667 209 ntBASIC18.57■□□□□ 0.56
NPAS2Q99743 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS2Q99743 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS2Q99743 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS2Q99743 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS2Q99743 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NPAS2Q99743 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms