Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MEIS3Q99687 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.81■■□□□ 1.4
MEIS3Q99687 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MEIS3Q99687 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.8■■□□□ 1.4
MEIS3Q99687 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
MEIS3Q99687 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.8■■□□□ 1.4
MEIS3Q99687 AC006333.2-201ENST00000607957 2099 ntBASIC23.8■■□□□ 1.4
MEIS3Q99687 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.8■■□□□ 1.4
MEIS3Q99687 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 TSPY14P-201ENST00000303979 915 ntBASIC23.8■■□□□ 1.4
MEIS3Q99687 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
MEIS3Q99687 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.8■■□□□ 1.4
MEIS3Q99687 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.8■■□□□ 1.4
MEIS3Q99687 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.8■■□□□ 1.4
MEIS3Q99687 KRT8P3-201ENST00000519669 1449 ntBASIC23.8■■□□□ 1.4
MEIS3Q99687 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.8■■□□□ 1.4
MEIS3Q99687 AC012306.2-201ENST00000609350 630 ntBASIC23.8■■□□□ 1.4
MEIS3Q99687 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.8■■□□□ 1.4
MEIS3Q99687 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MEIS3Q99687 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.79■■□□□ 1.4
MEIS3Q99687 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MEIS3Q99687 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
MEIS3Q99687 AC092338.2-201ENST00000568827 1415 ntBASIC23.79■■□□□ 1.4
MEIS3Q99687 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.79■■□□□ 1.4
MEIS3Q99687 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
MEIS3Q99687 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MEIS3Q99687 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.79■■□□□ 1.4
MEIS3Q99687 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MEIS3Q99687 CA15P1-201ENST00000481698 905 ntBASIC23.79■■□□□ 1.4
MEIS3Q99687 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.79■■□□□ 1.4
MEIS3Q99687 C2orf69P3-201ENST00000565542 1120 ntBASIC23.79■■□□□ 1.4
MEIS3Q99687 MIR4674-201ENST00000582457 87 ntBASIC23.79■■□□□ 1.4
MEIS3Q99687 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.79■■□□□ 1.4
MEIS3Q99687 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
MEIS3Q99687 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MEIS3Q99687 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
MEIS3Q99687 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.79■■□□□ 1.4
MEIS3Q99687 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.79■■□□□ 1.4
MEIS3Q99687 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.78■■□□□ 1.4
MEIS3Q99687 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.78■■□□□ 1.4
MEIS3Q99687 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.78■■□□□ 1.4
MEIS3Q99687 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
MEIS3Q99687 AC133561.5-201ENST00000635547 218 ntBASIC23.78■■□□□ 1.4
MEIS3Q99687 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MEIS3Q99687 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MEIS3Q99687 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
MEIS3Q99687 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.77■■□□□ 1.4
MEIS3Q99687 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 AC018445.3-201ENST00000624177 1945 ntBASIC23.77■■□□□ 1.4
MEIS3Q99687 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
MEIS3Q99687 AC211429.1-201ENST00000415277 523 ntBASIC23.77■■□□□ 1.4
MEIS3Q99687 SLC25A1P2-201ENST00000430693 912 ntBASIC23.77■■□□□ 1.4
MEIS3Q99687 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.77■■□□□ 1.4
MEIS3Q99687 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.77■■□□□ 1.4
MEIS3Q99687 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
MEIS3Q99687 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.77■■□□□ 1.4
MEIS3Q99687 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.77■■□□□ 1.4
MEIS3Q99687 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MEIS3Q99687 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.76■■□□□ 1.39
MEIS3Q99687 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.76■■□□□ 1.39
MEIS3Q99687 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
MEIS3Q99687 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.76■■□□□ 1.39
MEIS3Q99687 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.76■■□□□ 1.39
MEIS3Q99687 AC007663.1-201ENST00000438948 1240 ntBASIC23.76■■□□□ 1.39
MEIS3Q99687 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
MEIS3Q99687 EGLN1P1-201ENST00000531623 762 ntBASIC23.76■■□□□ 1.39
MEIS3Q99687 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.76■■□□□ 1.39
MEIS3Q99687 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MEIS3Q99687 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.76■■□□□ 1.39
MEIS3Q99687 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.76■■□□□ 1.39
MEIS3Q99687 LINC01568-207ENST00000641790 1380 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms