Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GAFA1Q96PS6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 AC018445.3-201ENST00000624177 1945 ntBASIC15.8■□□□□ 0.12
GAFA1Q96PS6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 BX323043.1-201ENST00000641006 1765 ntBASIC15.8■□□□□ 0.12
GAFA1Q96PS6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GAFA1Q96PS6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.79■□□□□ 0.12
GAFA1Q96PS6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 KRT8P3-201ENST00000519669 1449 ntBASIC15.79■□□□□ 0.12
GAFA1Q96PS6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 AP000974.1-201ENST00000623909 2387 ntBASIC15.79■□□□□ 0.12
GAFA1Q96PS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GAFA1Q96PS6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.78■□□□□ 0.12
GAFA1Q96PS6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms