Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC46A1Q96NT5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 KRT8P11-201ENST00000409686 1436 ntBASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 AC012313.10-201ENST00000623509 926 ntBASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC46A1Q96NT5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC46A1Q96NT5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC46A1Q96NT5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms