Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCD1Q96GM5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 MIR4674-201ENST00000582457 87 ntBASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCD1Q96GM5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMARCD1Q96GM5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 AL138966.2-201ENST00000621997 464 ntBASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCD1Q96GM5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 KRT8P45-201ENST00000414328 1447 ntBASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 GPAT2P1-201ENST00000444924 1672 ntBASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.95■□□□□ 0.78
SMARCD1Q96GM5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms