Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNRNP40Q96DI7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 AL023284.2-201ENST00000405850 579 ntBASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 AC079602.3-201ENST00000623931 403 ntBASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRNP40Q96DI7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 IFNL4P1-201ENST00000607083 540 ntBASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRNP40Q96DI7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 KRT18P1-202ENST00000452408 1331 ntBASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 SEC1P-202ENST00000473944 940 ntBASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 AC093525.10-201ENST00000625130 1569 ntBASIC17.05■□□□□ 0.32
SNRNP40Q96DI7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms