Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF25Q96BH1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF25Q96BH1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF25Q96BH1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 KRT18P6-201ENST00000555540 1265 ntBASIC19.96■□□□□ 0.79
RNF25Q96BH1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 AL023875.1-201ENST00000640777 796 ntBASIC19.96■□□□□ 0.79
RNF25Q96BH1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF25Q96BH1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF25Q96BH1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 AC005332.8-201ENST00000622750 2735 ntBASIC19.95■□□□□ 0.78
RNF25Q96BH1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 MTND4LP12-201ENST00000448237 295 ntBASIC19.95■□□□□ 0.78
RNF25Q96BH1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 AC004264.1-201ENST00000608354 794 ntBASIC19.95■□□□□ 0.78
RNF25Q96BH1 AP003400.6-201ENST00000624698 740 ntBASIC19.95■□□□□ 0.78
RNF25Q96BH1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 HLA-A-209ENST00000638375 975 ntBASIC19.95■□□□□ 0.78
RNF25Q96BH1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
RNF25Q96BH1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF25Q96BH1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.94■□□□□ 0.78
RNF25Q96BH1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 C1QL1P1-201ENST00000568105 661 ntBASIC19.94■□□□□ 0.78
RNF25Q96BH1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF25Q96BH1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF25Q96BH1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms