Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.82■□□□□ 0.28
RFT1Q96AA3 CDCA4P2-201ENST00000441182 718 ntBASIC16.82■□□□□ 0.28
RFT1Q96AA3 AC133552.2-202ENST00000575694 574 ntBASIC16.82■□□□□ 0.28
RFT1Q96AA3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RFT1Q96AA3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.82■□□□□ 0.28
RFT1Q96AA3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.81■□□□□ 0.28
RFT1Q96AA3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 AC141586.3-201ENST00000562166 1838 ntBASIC16.81■□□□□ 0.28
RFT1Q96AA3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RFT1Q96AA3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.81■□□□□ 0.28
RFT1Q96AA3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RFT1Q96AA3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.8■□□□□ 0.28
RFT1Q96AA3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 AC026185.1-201ENST00000445748 174 ntBASIC16.79■□□□□ 0.28
RFT1Q96AA3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 AL137784.2-201ENST00000607332 1000 ntBASIC16.79■□□□□ 0.28
RFT1Q96AA3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFT1Q96AA3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.79■□□□□ 0.28
RFT1Q96AA3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms