Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.05■□□□□ 0.32
CPNE4Q96A23 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 SLC25A1P2-201ENST00000430693 912 ntBASIC17.05■□□□□ 0.32
CPNE4Q96A23 CCR12P-201ENST00000446203 998 ntBASIC17.05■□□□□ 0.32
CPNE4Q96A23 AC128688.1-201ENST00000487626 519 ntBASIC17.05■□□□□ 0.32
CPNE4Q96A23 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 TEX21P-204ENST00000641479 1693 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 TSPY14P-201ENST00000303979 915 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 EGLN1P1-201ENST00000531623 762 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 LINC01023-201ENST00000606054 436 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 AC133561.5-201ENST00000635547 218 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 KRT8P9-201ENST00000558927 1449 ntBASIC17.04■□□□□ 0.32
CPNE4Q96A23 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CPNE4Q96A23 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPNE4Q96A23 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 AC116562.4-202ENST00000641738 218 ntBASIC17.03■□□□□ 0.32
CPNE4Q96A23 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPNE4Q96A23 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.03■□□□□ 0.32
CPNE4Q96A23 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE4Q96A23 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE4Q96A23 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE4Q96A23 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 CYP2D8P-201ENST00000433633 1490 ntBASIC17.02■□□□□ 0.32
CPNE4Q96A23 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE4Q96A23 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.02■□□□□ 0.32
CPNE4Q96A23 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.02■□□□□ 0.32
CPNE4Q96A23 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPNE4Q96A23 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms