Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 ECEL1P3-201ENST00000427961 737 ntBASIC19.45■□□□□ 0.7
SCG3Q8WXD2 AP002982.1-201ENST00000492365 877 ntBASIC19.45■□□□□ 0.7
SCG3Q8WXD2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCG3Q8WXD2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 AC073195.1-201ENST00000607241 877 ntBASIC19.44■□□□□ 0.7
SCG3Q8WXD2 AC026471.5-201ENST00000615068 467 ntBASIC19.44■□□□□ 0.7
SCG3Q8WXD2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 AP006587.1-201ENST00000534129 1502 ntBASIC19.44■□□□□ 0.7
SCG3Q8WXD2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.44■□□□□ 0.7
SCG3Q8WXD2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 CD177P1-201ENST00000606252 935 ntBASIC19.43■□□□□ 0.7
SCG3Q8WXD2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCG3Q8WXD2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 LTB4R2-202ENST00000528054 3092 ntBASIC19.42■□□□□ 0.7
SCG3Q8WXD2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.42■□□□□ 0.7
SCG3Q8WXD2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.42■□□□□ 0.7
SCG3Q8WXD2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCG3Q8WXD2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms