Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 TCF3P1-201ENST00000423021 1937 ntBASIC19.04■□□□□ 0.64
HMGB4Q8WW32 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGB4Q8WW32 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGB4Q8WW32 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 AL023284.2-201ENST00000405850 579 ntBASIC19.02■□□□□ 0.64
HMGB4Q8WW32 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGB4Q8WW32 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
HMGB4Q8WW32 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.01■□□□□ 0.63
HMGB4Q8WW32 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMGB4Q8WW32 AC112907.3-201ENST00000577781 2400 ntBASIC19.01■□□□□ 0.63
HMGB4Q8WW32 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGB4Q8WW32 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms