Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AL138781.2-201ENST00000617896 1843 ntBASIC19.24■□□□□ 0.67
PTCD2Q8WV60 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AC073912.3-201ENST00000624414 853 ntBASIC19.24■□□□□ 0.67
PTCD2Q8WV60 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 KRT16P1-201ENST00000399124 1418 ntBASIC19.24■□□□□ 0.67
PTCD2Q8WV60 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTCD2Q8WV60 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 MESTP1-201ENST00000404287 994 ntBASIC19.23■□□□□ 0.67
PTCD2Q8WV60 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 AC093525.10-201ENST00000625130 1569 ntBASIC19.23■□□□□ 0.67
PTCD2Q8WV60 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTCD2Q8WV60 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 AC079598.2-202ENST00000546624 1451 ntBASIC19.22■□□□□ 0.67
PTCD2Q8WV60 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 AL445675.2-201ENST00000620291 557 ntBASIC19.22■□□□□ 0.67
PTCD2Q8WV60 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTCD2Q8WV60 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 AC211429.1-201ENST00000415277 523 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 ECEL1P3-201ENST00000427961 737 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 AC004980.1-204ENST00000429707 299 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 RBM17P1-201ENST00000453646 1190 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms