Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 AP005212.1-201ENST00000581547 1997 ntBASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 AC009065.1-201ENST00000564055 1225 ntBASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 AC027796.2-201ENST00000575326 344 ntBASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 AP001160.2-201ENST00000596071 487 ntBASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
ARHGEF40Q8TER5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 AC104390.1-201ENST00000555663 520 ntBASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
ARHGEF40Q8TER5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 IGHV3-41-201ENST00000613121 348 ntBASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 AC009237.14-201ENST00000609975 1594 ntBASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ARHGEF40Q8TER5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 GAS2L1P1-201ENST00000420145 1480 ntBASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 GPX1P2-201ENST00000429271 606 ntBASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 RPL13AP23-201ENST00000480739 586 ntBASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 AC093909.1-201ENST00000504731 1122 ntBASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 AF106564.1-201ENST00000607058 2553 ntBASIC28.14■■■□□ 2.1
ARHGEF40Q8TER5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
ARHGEF40Q8TER5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC28.14■■■□□ 2.09
ARHGEF40Q8TER5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
ARHGEF40Q8TER5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
ARHGEF40Q8TER5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC28.13■■■□□ 2.09
ARHGEF40Q8TER5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ARHGEF40Q8TER5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms