Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 NEK4P2-201ENST00000580004 1012 ntBASIC19.23■□□□□ 0.67
CHD5Q8TDI0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CHD5Q8TDI0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 AL512353.2-201ENST00000448759 1962 ntBASIC19.21■□□□□ 0.67
CHD5Q8TDI0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 MIR4674-201ENST00000582457 87 ntBASIC19.21■□□□□ 0.67
CHD5Q8TDI0 AL138966.2-201ENST00000621997 464 ntBASIC19.21■□□□□ 0.67
CHD5Q8TDI0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHD5Q8TDI0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 AC068587.9-201ENST00000641814 219 ntBASIC19.2■□□□□ 0.66
CHD5Q8TDI0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CHD5Q8TDI0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 AC083849.1-201ENST00000615227 514 ntBASIC19.19■□□□□ 0.66
CHD5Q8TDI0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD5Q8TDI0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD5Q8TDI0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms