Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 PCDHA1-201ENST00000378133 2726 ntBASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms