Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 AC098590.1-201ENST00000468126 897 ntBASIC17.78■□□□□ 0.44
NUP43Q8NFH3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
NUP43Q8NFH3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NUP43Q8NFH3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AC004951.3-201ENST00000418645 1148 ntBASIC17.77■□□□□ 0.44
NUP43Q8NFH3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AL158047.1-201ENST00000445918 881 ntBASIC17.77■□□□□ 0.44
NUP43Q8NFH3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 RCC2P6-201ENST00000526625 1557 ntBASIC17.77■□□□□ 0.44
NUP43Q8NFH3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP43Q8NFH3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NUP43Q8NFH3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 KRT8P11-201ENST00000409686 1436 ntBASIC17.76■□□□□ 0.43
NUP43Q8NFH3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 AC091390.4-202ENST00000476426 537 ntBASIC17.76■□□□□ 0.43
NUP43Q8NFH3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NUP43Q8NFH3 AC020763.4-201ENST00000623414 4170 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms