Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 AL161938.1-201ENST00000569833 2180 ntBASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.94■□□□□ 0.46
ARHGEF39Q8N4T4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 AC092865.7-201ENST00000641832 219 ntBASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.93■□□□□ 0.46
ARHGEF39Q8N4T4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 RN7SL850P-201ENST00000579959 291 ntBASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ARHGEF39Q8N4T4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 KRT8P45-201ENST00000414328 1447 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 AL023284.2-201ENST00000405850 579 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 AL137013.1-201ENST00000432946 1228 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 AL512353.2-201ENST00000448759 1962 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 AL049812.1-201ENST00000432563 2267 ntBASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ARHGEF39Q8N4T4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 KRT8P32-201ENST00000512863 1461 ntBASIC17.9■□□□□ 0.46
ARHGEF39Q8N4T4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms