Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 AC140113.3-201ENST00000605663 199 ntBASIC20.57■□□□□ 0.88
VPS52Q8N1B4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.57■□□□□ 0.88
VPS52Q8N1B4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 AP003041.3-201ENST00000527151 707 ntBASIC20.56■□□□□ 0.88
VPS52Q8N1B4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 AP000550.4-202ENST00000639755 178 ntBASIC20.56■□□□□ 0.88
VPS52Q8N1B4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VPS52Q8N1B4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 HOMER2P1-201ENST00000455653 964 ntBASIC20.55■□□□□ 0.88
VPS52Q8N1B4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 AL023973.1-201ENST00000624619 620 ntBASIC20.55■□□□□ 0.88
VPS52Q8N1B4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS52Q8N1B4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 AL441883.1-201ENST00000566170 1045 ntBASIC20.54■□□□□ 0.88
VPS52Q8N1B4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms