Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SIX5Q8N196 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SIX5Q8N196 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIX5Q8N196 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.43■□□□□ 0.7
SIX5Q8N196 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SIX5Q8N196 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SIX5Q8N196 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.43■□□□□ 0.7
SIX5Q8N196 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.43■□□□□ 0.7
SIX5Q8N196 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.43■□□□□ 0.7
SIX5Q8N196 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.43■□□□□ 0.7
SIX5Q8N196 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.43■□□□□ 0.7
SIX5Q8N196 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SIX5Q8N196 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SIX5Q8N196 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIX5Q8N196 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.43■□□□□ 0.7
SIX5Q8N196 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX5Q8N196 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SIX5Q8N196 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.42■□□□□ 0.7
SIX5Q8N196 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.42■□□□□ 0.7
SIX5Q8N196 LINC00265-3P-201ENST00000447588 903 ntBASIC19.42■□□□□ 0.7
SIX5Q8N196 FOSL1P1-201ENST00000511041 816 ntBASIC19.42■□□□□ 0.7
SIX5Q8N196 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX5Q8N196 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SIX5Q8N196 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIX5Q8N196 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIX5Q8N196 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SIX5Q8N196 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.42■□□□□ 0.7
SIX5Q8N196 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
SIX5Q8N196 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 AC093525.10-201ENST00000625130 1569 ntBASIC19.41■□□□□ 0.7
SIX5Q8N196 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.41■□□□□ 0.7
SIX5Q8N196 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.41■□□□□ 0.7
SIX5Q8N196 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
SIX5Q8N196 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SIX5Q8N196 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIX5Q8N196 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX5Q8N196 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.4■□□□□ 0.7
SIX5Q8N196 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
SIX5Q8N196 TSPY22P-201ENST00000427496 604 ntBASIC19.4■□□□□ 0.7
SIX5Q8N196 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
SIX5Q8N196 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIX5Q8N196 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 AL137060.1-201ENST00000618151 2648 ntBASIC19.4■□□□□ 0.7
SIX5Q8N196 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SIX5Q8N196 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms