Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 MTMR9LP-203ENST00000426597 1545 ntBASIC23.54■■□□□ 1.36
SMC5Q8IY18 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 AC068587.9-201ENST00000641814 219 ntBASIC23.54■■□□□ 1.36
SMC5Q8IY18 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMC5Q8IY18 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.54■■□□□ 1.36
SMC5Q8IY18 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 RARRES2P10-201ENST00000564312 460 ntBASIC23.53■■□□□ 1.36
SMC5Q8IY18 AC026271.3-201ENST00000571884 352 ntBASIC23.53■■□□□ 1.36
SMC5Q8IY18 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 KRT8P32-201ENST00000512863 1461 ntBASIC23.53■■□□□ 1.36
SMC5Q8IY18 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.53■■□□□ 1.36
SMC5Q8IY18 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.53■■□□□ 1.36
SMC5Q8IY18 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMC5Q8IY18 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SMC5Q8IY18 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 KRT8P3-201ENST00000519669 1449 ntBASIC23.52■■□□□ 1.36
SMC5Q8IY18 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.52■■□□□ 1.36
SMC5Q8IY18 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.52■■□□□ 1.36
SMC5Q8IY18 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 AF186192.3-201ENST00000583427 947 ntBASIC23.52■■□□□ 1.36
SMC5Q8IY18 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.52■■□□□ 1.36
SMC5Q8IY18 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMC5Q8IY18 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 KRT16P1-201ENST00000399124 1418 ntBASIC23.51■■□□□ 1.35
SMC5Q8IY18 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AC135050.7-201ENST00000624508 2218 ntBASIC23.51■■□□□ 1.35
SMC5Q8IY18 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AL353807.1-201ENST00000427475 662 ntBASIC23.51■■□□□ 1.35
SMC5Q8IY18 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AL359736.2-201ENST00000621992 437 ntBASIC23.51■■□□□ 1.35
SMC5Q8IY18 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SMC5Q8IY18 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMC5Q8IY18 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 AC004951.3-201ENST00000418645 1148 ntBASIC23.5■■□□□ 1.35
SMC5Q8IY18 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 AC130371.2-201ENST00000619443 611 ntBASIC23.5■■□□□ 1.35
SMC5Q8IY18 BICD1-207ENST00000551848 1962 ntBASIC23.5■■□□□ 1.35
SMC5Q8IY18 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.5■■□□□ 1.35
SMC5Q8IY18 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMC5Q8IY18 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SMC5Q8IY18 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.49■■□□□ 1.35
SMC5Q8IY18 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SMC5Q8IY18 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMC5Q8IY18 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms