Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RNF135Q8IUD6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF135Q8IUD6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF135Q8IUD6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RNF135Q8IUD6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 LINC01311-201ENST00000565162 1445 ntBASIC20.14■□□□□ 0.81
RNF135Q8IUD6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 FAAHP1-202ENST00000446499 1238 ntBASIC20.14■□□□□ 0.81
RNF135Q8IUD6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF135Q8IUD6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.13■□□□□ 0.81
RNF135Q8IUD6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF135Q8IUD6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 AC092329.2-201ENST00000598402 547 ntBASIC20.12■□□□□ 0.81
RNF135Q8IUD6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF135Q8IUD6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.11■□□□□ 0.81
RNF135Q8IUD6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CA15P1-201ENST00000481698 905 ntBASIC20.11■□□□□ 0.81
RNF135Q8IUD6 UNC93B7-201ENST00000509439 705 ntBASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF135Q8IUD6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF135Q8IUD6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF135Q8IUD6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF135Q8IUD6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms