Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 MIR939-201ENST00000401314 82 ntBASIC15.81■□□□□ 0.12
ZNF546Q86UE3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AL162741.1-201ENST00000565563 1558 ntBASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AL356652.1-201ENST00000615962 565 ntBASIC15.81■□□□□ 0.12
ZNF546Q86UE3 AL358852.1-201ENST00000623174 1268 ntBASIC15.81■□□□□ 0.12
ZNF546Q86UE3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF546Q86UE3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 AC096631.2-201ENST00000436136 790 ntBASIC15.8■□□□□ 0.12
ZNF546Q86UE3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 AF213884.3-201ENST00000563833 479 ntBASIC15.8■□□□□ 0.12
ZNF546Q86UE3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZNF546Q86UE3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 PHGDH-210ENST00000641115 1638 ntBASIC15.79■□□□□ 0.12
ZNF546Q86UE3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF546Q86UE3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms