Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 KRT18P67-201ENST00000432816 1264 ntBASIC13.22□□□□□ -0.29
CSMD3Q7Z407 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSMD3Q7Z407 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 MIR3917-201ENST00000580971 93 ntBASIC13.21□□□□□ -0.29
CSMD3Q7Z407 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD3Q7Z407 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD3Q7Z407 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD3Q7Z407 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD3Q7Z407 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD3Q7Z407 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AC091607.1-201ENST00000490318 1060 ntBASIC13.2□□□□□ -0.3
CSMD3Q7Z407 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AL355385.1-201ENST00000606123 409 ntBASIC13.2□□□□□ -0.3
CSMD3Q7Z407 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AC092720.2-201ENST00000602388 1665 ntBASIC13.2□□□□□ -0.3
CSMD3Q7Z407 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD3Q7Z407 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CSMD3Q7Z407 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms