Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SCXQ7RTU7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.57□□□□□ -0.4
SCXQ7RTU7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 KRT8P17-201ENST00000453110 1448 ntBASIC12.56□□□□□ -0.4
SCXQ7RTU7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 DPP3P2-201ENST00000416030 1696 ntBASIC12.56□□□□□ -0.4
SCXQ7RTU7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SCXQ7RTU7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCXQ7RTU7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 AC006128.1-201ENST00000624704 1661 ntBASIC12.55□□□□□ -0.4
SCXQ7RTU7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 AC005332.8-201ENST00000622750 2735 ntBASIC12.55□□□□□ -0.4
SCXQ7RTU7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.55□□□□□ -0.4
SCXQ7RTU7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCXQ7RTU7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms