Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 AC141586.3-201ENST00000562166 1838 ntBASIC22.55■■□□□ 1.2
CTR9Q6PD62 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 KRT8P45-201ENST00000414328 1447 ntBASIC22.55■■□□□ 1.2
CTR9Q6PD62 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CTR9Q6PD62 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTR9Q6PD62 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CTR9Q6PD62 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.54■■□□□ 1.2
CTR9Q6PD62 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 IRX1P1-201ENST00000438849 1838 ntBASIC22.53■■□□□ 1.2
CTR9Q6PD62 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 AC141257.4-201ENST00000634557 245 ntBASIC22.53■■□□□ 1.2
CTR9Q6PD62 AC136944.6-201ENST00000634818 245 ntBASIC22.53■■□□□ 1.2
CTR9Q6PD62 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.53■■□□□ 1.2
CTR9Q6PD62 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTR9Q6PD62 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 FEM1AP3-201ENST00000403722 1741 ntBASIC22.52■■□□□ 1.2
CTR9Q6PD62 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 BX664615.1-201ENST00000443558 458 ntBASIC22.52■■□□□ 1.2
CTR9Q6PD62 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.52■■□□□ 1.2
CTR9Q6PD62 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CTR9Q6PD62 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.52■■□□□ 1.19
CTR9Q6PD62 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CTR9Q6PD62 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTR9Q6PD62 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.51■■□□□ 1.19
CTR9Q6PD62 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CTR9Q6PD62 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CTR9Q6PD62 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms