Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM53Q6P2H8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 UNC93B5-201ENST00000530315 699 ntBASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 HCG11-201ENST00000411553 5696 ntBASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM53Q6P2H8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms