Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 AL358852.1-201ENST00000623174 1268 ntBASIC14.36□□□□□ -0.11
MRPL54Q6P161 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.36□□□□□ -0.11
MRPL54Q6P161 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
MRPL54Q6P161 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 KRT8P20-201ENST00000423953 1409 ntBASIC14.35□□□□□ -0.11
MRPL54Q6P161 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 AC079140.4-201ENST00000507448 529 ntBASIC14.35□□□□□ -0.11
MRPL54Q6P161 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.35□□□□□ -0.11
MRPL54Q6P161 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 LINC00896-202ENST00000609602 2128 ntBASIC14.35□□□□□ -0.11
MRPL54Q6P161 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MRPL54Q6P161 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 AC087633.2-202ENST00000565166 1439 ntBASIC14.34□□□□□ -0.11
MRPL54Q6P161 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 AC010141.2-201ENST00000452426 721 ntBASIC14.34□□□□□ -0.11
MRPL54Q6P161 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MRPL54Q6P161 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MRPL54Q6P161 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL54Q6P161 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL54Q6P161 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
MRPL54Q6P161 AC126763.1-201ENST00000552015 2118 ntBASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms