Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 AL161938.1-201ENST00000569833 2180 ntBASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 MMP23A-201ENST00000234610 1017 ntBASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 AL390955.1-201ENST00000428694 934 ntBASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 CA15P1-201ENST00000481698 905 ntBASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PPP4R3AQ6IN85 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP4R3AQ6IN85 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP4R3AQ6IN85 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PPP4R3AQ6IN85 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.58■■□□□ 1.04
PPP4R3AQ6IN85 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PPP4R3AQ6IN85 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PPP4R3AQ6IN85 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.56■■□□□ 1.04
PPP4R3AQ6IN85 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms