Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CROCCP3-202ENST00000420820 1947 ntBASIC22.03■■□□□ 1.12
KRT40Q6A162 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
KRT40Q6A162 AC120498.9-201ENST00000339021 3867 ntBASIC22.03■■□□□ 1.12
KRT40Q6A162 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT40Q6A162 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT40Q6A162 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KRT40Q6A162 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT40Q6A162 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
KRT40Q6A162 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KRT40Q6A162 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
KRT40Q6A162 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
KRT40Q6A162 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
KRT40Q6A162 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.02■■□□□ 1.12
KRT40Q6A162 CR392000.1-201ENST00000624770 1228 ntBASIC22.02■■□□□ 1.12
KRT40Q6A162 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
KRT40Q6A162 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT40Q6A162 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
KRT40Q6A162 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
KRT40Q6A162 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.01■■□□□ 1.11
KRT40Q6A162 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.01■■□□□ 1.11
KRT40Q6A162 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
KRT40Q6A162 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT40Q6A162 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT40Q6A162 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
KRT40Q6A162 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
KRT40Q6A162 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22■■□□□ 1.11
KRT40Q6A162 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 KRT16P1-201ENST00000399124 1418 ntBASIC22■■□□□ 1.11
KRT40Q6A162 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22■■□□□ 1.11
KRT40Q6A162 AL049597.2-201ENST00000565575 961 ntBASIC22■■□□□ 1.11
KRT40Q6A162 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 AC073195.1-201ENST00000607241 877 ntBASIC22■■□□□ 1.11
KRT40Q6A162 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
KRT40Q6A162 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22■■□□□ 1.11
KRT40Q6A162 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
KRT40Q6A162 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22■■□□□ 1.11
KRT40Q6A162 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
KRT40Q6A162 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.99■■□□□ 1.11
KRT40Q6A162 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
KRT40Q6A162 AL135905.2-201ENST00000584934 1404 ntBASIC21.99■■□□□ 1.11
KRT40Q6A162 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.99■■□□□ 1.11
KRT40Q6A162 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
KRT40Q6A162 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
KRT40Q6A162 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 RCC2P6-201ENST00000526625 1557 ntBASIC21.99■■□□□ 1.11
KRT40Q6A162 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
KRT40Q6A162 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT40Q6A162 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT40Q6A162 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
KRT40Q6A162 KRT8P11-201ENST00000409686 1436 ntBASIC21.98■■□□□ 1.11
KRT40Q6A162 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
KRT40Q6A162 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
KRT40Q6A162 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
KRT40Q6A162 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 AC091390.4-202ENST00000476426 537 ntBASIC21.98■■□□□ 1.11
KRT40Q6A162 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.98■■□□□ 1.11
KRT40Q6A162 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.98■■□□□ 1.11
KRT40Q6A162 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT40Q6A162 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT40Q6A162 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT40Q6A162 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms