Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LYSMD4Q5XG99 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 TSPY19P-201ENST00000418461 509 ntBASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 TSPY18P-201ENST00000441642 509 ntBASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 EMBP1-201ENST00000458200 901 ntBASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 AC091304.2-201ENST00000564639 760 ntBASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 AL732292.2-201ENST00000609649 430 ntBASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD4Q5XG99 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 DRAXINP1-201ENST00000437611 948 ntBASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 TPSP2-201ENST00000561760 610 ntBASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD4Q5XG99 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 AL031008.1-201ENST00000619963 541 ntBASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 KRT8P3-201ENST00000519669 1449 ntBASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
LYSMD4Q5XG99 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 TOB2P1-201ENST00000469761 992 ntBASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 AC012615.1-201ENST00000565797 1299 ntBASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LYSMD4Q5XG99 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LYSMD4Q5XG99 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms