Protein–RNA interactions for Protein: Q5T5X7

BEND3, BEN domain-containing protein 3, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3Q5T5X7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEND3Q5T5X7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.81■■□□□ 1.4
BEND3Q5T5X7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEND3Q5T5X7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEND3Q5T5X7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 WWOX-216ENST00000569818 525 ntBASIC23.8■■□□□ 1.4
BEND3Q5T5X7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.8■■□□□ 1.4
BEND3Q5T5X7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 COX11P1-201ENST00000489116 835 ntBASIC23.79■■□□□ 1.4
BEND3Q5T5X7 YBX1P2-201ENST00000489612 999 ntBASIC23.79■■□□□ 1.4
BEND3Q5T5X7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 AC011558.1-201ENST00000623459 338 ntBASIC23.79■■□□□ 1.4
BEND3Q5T5X7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 KRT8P32-201ENST00000512863 1461 ntBASIC23.79■■□□□ 1.4
BEND3Q5T5X7 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.79■■□□□ 1.4
BEND3Q5T5X7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEND3Q5T5X7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.78■■□□□ 1.4
BEND3Q5T5X7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 AC009947.2-201ENST00000444014 672 ntBASIC23.78■■□□□ 1.4
BEND3Q5T5X7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 AL049597.2-201ENST00000565575 961 ntBASIC23.78■■□□□ 1.4
BEND3Q5T5X7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
BEND3Q5T5X7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 AK4P3-201ENST00000418260 669 ntBASIC23.77■■□□□ 1.4
BEND3Q5T5X7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEND3Q5T5X7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms