Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VARS2Q5ST30 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VARS2Q5ST30 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 KRT8P3-201ENST00000519669 1449 ntBASIC20.12■□□□□ 0.81
VARS2Q5ST30 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
VARS2Q5ST30 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.12■□□□□ 0.81
VARS2Q5ST30 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.12■□□□□ 0.81
VARS2Q5ST30 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.12■□□□□ 0.81
VARS2Q5ST30 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.12■□□□□ 0.81
VARS2Q5ST30 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VARS2Q5ST30 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 FAM86EP-206ENST00000510506 987 ntBASIC20.11■□□□□ 0.81
VARS2Q5ST30 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 AC036111.1-201ENST00000533973 1582 ntBASIC20.11■□□□□ 0.81
VARS2Q5ST30 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.11■□□□□ 0.81
VARS2Q5ST30 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VARS2Q5ST30 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 STARP1-201ENST00000397973 869 ntBASIC20.1■□□□□ 0.81
VARS2Q5ST30 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 KRT18P56-201ENST00000507275 550 ntBASIC20.1■□□□□ 0.81
VARS2Q5ST30 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VARS2Q5ST30 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.1■□□□□ 0.81
VARS2Q5ST30 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 PCED1CP-201ENST00000419887 785 ntBASIC20.09■□□□□ 0.81
VARS2Q5ST30 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VARS2Q5ST30 MCCD1P1-208ENST00000445732 328 ntBASIC20.09■□□□□ 0.81
VARS2Q5ST30 AC112907.2-201ENST00000448639 330 ntBASIC20.09■□□□□ 0.81
VARS2Q5ST30 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.09■□□□□ 0.81
VARS2Q5ST30 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms