Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 AC066615.1-201ENST00000640911 628 ntBASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 AC093827.2-201ENST00000512654 315 ntBASIC20■□□□□ 0.79
PTPN20Q4JDL3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 MIR4497-201ENST00000583208 89 ntBASIC20■□□□□ 0.79
PTPN20Q4JDL3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPN20Q4JDL3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPN20Q4JDL3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 RBM17P1-201ENST00000453646 1190 ntBASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 AC097488.1-201ENST00000507834 756 ntBASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPN20Q4JDL3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AL355075.4-201ENST00000554988 638 ntBASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AC079598.2-202ENST00000546624 1451 ntBASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPN20Q4JDL3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 KRT8P3-201ENST00000519669 1449 ntBASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 TSPY15P-201ENST00000457163 923 ntBASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 AC083906.6-201ENST00000641366 219 ntBASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms