Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HTRA3P83110 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.1■■□□□ 1.13
HTRA3P83110 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HTRA3P83110 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 RPS2P1-201ENST00000434010 821 ntBASIC22.09■■□□□ 1.13
HTRA3P83110 BCRP1-201ENST00000444246 691 ntBASIC22.09■■□□□ 1.13
HTRA3P83110 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
HTRA3P83110 AC096582.2-201ENST00000510860 516 ntBASIC22.09■■□□□ 1.13
HTRA3P83110 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.09■■□□□ 1.13
HTRA3P83110 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.09■■□□□ 1.13
HTRA3P83110 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 MTDHP3-201ENST00000594186 672 ntBASIC22.09■■□□□ 1.13
HTRA3P83110 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
HTRA3P83110 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.09■■□□□ 1.13
HTRA3P83110 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.09■■□□□ 1.13
HTRA3P83110 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HTRA3P83110 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
HTRA3P83110 C9orf163-202ENST00000624034 2573 ntBASIC22.08■■□□□ 1.13
HTRA3P83110 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.08■■□□□ 1.13
HTRA3P83110 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.08■■□□□ 1.13
HTRA3P83110 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
HTRA3P83110 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.08■■□□□ 1.13
HTRA3P83110 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HTRA3P83110 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HTRA3P83110 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.08■■□□□ 1.13
HTRA3P83110 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.08■■□□□ 1.13
HTRA3P83110 RNA5SP416-201ENST00000516838 111 ntBASIC22.08■■□□□ 1.13
HTRA3P83110 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.08■■□□□ 1.13
HTRA3P83110 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.08■■□□□ 1.13
HTRA3P83110 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.08■■□□□ 1.13
HTRA3P83110 AL035252.4-201ENST00000624174 288 ntBASIC22.08■■□□□ 1.13
HTRA3P83110 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HTRA3P83110 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC22.08■■□□□ 1.13
HTRA3P83110 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HTRA3P83110 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
HTRA3P83110 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.07■■□□□ 1.12
HTRA3P83110 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.07■■□□□ 1.12
HTRA3P83110 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
HTRA3P83110 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.07■■□□□ 1.12
HTRA3P83110 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.07■■□□□ 1.12
HTRA3P83110 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.07■■□□□ 1.12
HTRA3P83110 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
HTRA3P83110 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HTRA3P83110 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 AC092474.2-201ENST00000424288 719 ntBASIC22.06■■□□□ 1.12
HTRA3P83110 AC005034.1-201ENST00000426657 489 ntBASIC22.06■■□□□ 1.12
HTRA3P83110 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.06■■□□□ 1.12
HTRA3P83110 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.06■■□□□ 1.12
HTRA3P83110 AC138761.1-201ENST00000584393 385 ntBASIC22.06■■□□□ 1.12
HTRA3P83110 MTDHP5-201ENST00000598980 586 ntBASIC22.06■■□□□ 1.12
HTRA3P83110 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HTRA3P83110 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.06■■□□□ 1.12
HTRA3P83110 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HTRA3P83110 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.06■■□□□ 1.12
HTRA3P83110 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.06■■□□□ 1.12
HTRA3P83110 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.06■■□□□ 1.12
HTRA3P83110 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HTRA3P83110 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
HTRA3P83110 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.05■■□□□ 1.12
HTRA3P83110 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HTRA3P83110 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms