Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SEC61A1P61619 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SEC61A1P61619 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.61■□□□□ 0.25
SEC61A1P61619 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.61■□□□□ 0.25
SEC61A1P61619 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.61■□□□□ 0.25
SEC61A1P61619 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SEC61A1P61619 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.61■□□□□ 0.25
SEC61A1P61619 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.61■□□□□ 0.25
SEC61A1P61619 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEC61A1P61619 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.61■□□□□ 0.25
SEC61A1P61619 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEC61A1P61619 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SEC61A1P61619 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.6■□□□□ 0.25
SEC61A1P61619 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.6■□□□□ 0.25
SEC61A1P61619 AC239809.2-201ENST00000415381 517 ntBASIC16.6■□□□□ 0.25
SEC61A1P61619 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SEC61A1P61619 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SEC61A1P61619 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.6■□□□□ 0.25
SEC61A1P61619 AP006294.2-201ENST00000641667 209 ntBASIC16.6■□□□□ 0.25
SEC61A1P61619 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SEC61A1P61619 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.6■□□□□ 0.25
SEC61A1P61619 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.6■□□□□ 0.25
SEC61A1P61619 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 KRT8P17-201ENST00000453110 1448 ntBASIC16.6■□□□□ 0.25
SEC61A1P61619 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.6■□□□□ 0.25
SEC61A1P61619 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SEC61A1P61619 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.59■□□□□ 0.25
SEC61A1P61619 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.59■□□□□ 0.25
SEC61A1P61619 UBE2SP1-201ENST00000450587 669 ntBASIC16.59■□□□□ 0.25
SEC61A1P61619 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.59■□□□□ 0.25
SEC61A1P61619 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 AL031963.3-201ENST00000606441 850 ntBASIC16.59■□□□□ 0.25
SEC61A1P61619 AC124016.1-201ENST00000609552 612 ntBASIC16.59■□□□□ 0.25
SEC61A1P61619 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
SEC61A1P61619 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms